Attempting to create surface boundary data ..... ------------------------------------------------------------ Grid_name: Cols0002562 Input rawdata files and corresponding meshes PFTs from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_landuse_ctsm52_histLUH2_2000.c20230226.nc mesh for pft /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc percent lake from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/lake_area/mksurf_lake_0.05x0.05_hist_clm5_hydrolakes_2000.cdf5.c20220325.nc mesh for percent lake /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc lake depth from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_LakePnDepth_3x3min_simyr2017_MODISgrid.cdf5.c200305.nc mesh for lake depth /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc inland wetland from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_lanwat.050425.nc mesh for wetland /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc soil texture mapunits from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_soil_mapunits_5x5min_WISE.c220330.nc soil texture (sand/clay, orgc) lookup: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_soil_lookup.10level.WISE.c220330.nc mesh for soil texture /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_5x5min_nomask_cdf5_c200129.nc soil color from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_soilcolor_ctsm52_histLUH2_2005.c20230226.nc mesh for soil color /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc fmax from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_fmax_0.125x0.125_c200220.nc mesh for fmax /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.125x0.125_nomask_cdf5_c200129.nc soil depth from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksf_soilthk_5x5min_ORNL-Soil_simyr1900-2015_c170630.nc mesh for soil depth /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_5x5min_nomask_cdf5_c200129.nc VOC emission factors from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_vocef_0.5x0.5_simyr2000.c110531.nc mesh for VOC pct emis /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc gdp from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_gdp_0.5x0.5_AVHRR_simyr2000.c130228.nc mesh for gdp /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc peat from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_peatf_0.5x0.5_AVHRR_simyr2000.c130228.nc mesh for peatlands /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc harvest from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_landuse_ctsm52_histLUH2_2000.c20230226.nc mesh for harvest /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc topography statistics from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_topostats_1km-merge-10min_HYDRO1K-merge-nomask_simyr2000.c130402.nc mesh for topography stats /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UGRID_1km-merge-10min_HYDRO1K-merge-nomask_cdf5_c130402.nc glaciers from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_glacier_3x3min_simyr2000.c20210708.nc with: 10 glacier elevation classes mesh for glacier /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc glacier region ID from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_GlacierRegion_10x10min_nomask_cd5_c220131.nc mesh for glacier region /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_10x10min_nomask_cdf5_c200129.nc urban from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/gao_oneill_urban/historical/urban_properties_GaoOneil_05deg_ThreeClass_2000_cdf5_c20220910.nc mesh for urban /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc urban topography from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_topo.10min.cdf5.c220201.nc mesh for urban topography /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_10x10min_nomask_cdf5_c200129.nc mesh for lai/sai /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc mesh for ag fire pk month /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc abm from: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_abm_0.5x0.5_AVHRR_simyr2000.c130201.nc VIC parameters from: mesh for VIC parameters ================================================================================ Model grid configuration variables mksrf_fgrid_mesh = /glade/p/cesm/cseg/inputdata/share/meshes/mpasa480_ESMFmesh-211109.nc nlon= 2562 nlat= 1 Grid_size: 2562 ================================================================================ Output configuration variables output file is 1d format Output ALL data in file as 64-bit Only output ESMF PET files if fatal errors happen in ESMF npes = 512 grid size = 2562 Opening file and reading pio_iotype from txt file with the same name (mkpftInit) num_natpft = 14 (mkpftInit) natpft_lb = 0 (mkpftInit) natpft_ub = 14 (mkpftInit) num_cft = 64 (mkpftInit) cft_lb = 15 (mkpftInit) cft_ub = 78 Creating surface datasets with extra types for crops; total pfts = 78 ================================================================================ opening output file surfdata_mpasa480_hist_2000_78pfts_c240130.nc (mkpio_wopen) creating file surfdata_mpasa480_hist_2000_78pfts_c240130.nc ================================================================================ Attempting to create model lats and lons from model mesh ..... Successfully made model lats and lons mksrfdata writing out model grid mksrfdata writing out LONGXY mksrfdata writing out LATIXY Initialization is complete, going on to process types of input files Attempting to make LAIs/SAIs/heights ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_pftlaihgt_ctsm52_histLUH2_2005.c20230226.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc WARNING: mklai(): parameter numpft+1 = 79 does not equal input dataset numpft = 16 This inconsistency used to stop the program. Now we allow it because crop pfts 17-last are assumed to never use satellite lai data. LAI Output for month 1 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.486 2.486 2 1.766 1.766 3 0.332 0.332 4 4.737 4.737 5 3.807 3.807 6 1.676 1.676 7 1.217 1.217 8 0.898 0.898 9 0.462 0.462 10 0.474 0.474 11 0.183 0.183 12 0.356 0.356 13 0.797 0.797 14 0.933 0.933 15 1.499 1.499 Successfully made LAIs/SAIs/heights for month 1 LAI Output for month 2 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.392 2.392 2 1.626 1.626 3 0.305 0.305 4 4.727 4.727 5 3.911 3.911 6 1.695 1.695 7 1.268 1.268 8 0.911 0.911 9 0.484 0.484 10 0.521 0.521 11 0.188 0.188 12 0.372 0.372 13 0.813 0.813 14 0.962 0.962 15 1.554 1.554 Successfully made LAIs/SAIs/heights for month 2 LAI Output for month 3 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.357 2.357 2 1.441 1.441 3 0.241 0.241 4 4.778 4.778 5 3.986 3.986 6 1.815 1.815 7 1.252 1.252 8 0.714 0.714 9 0.607 0.607 10 0.587 0.587 11 0.177 0.177 12 0.341 0.341 13 0.865 0.865 14 1.043 1.043 15 1.646 1.646 Successfully made LAIs/SAIs/heights for month 3 LAI Output for month 4 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.479 2.479 2 1.368 1.368 3 0.228 0.228 4 4.879 4.879 5 4.179 4.179 6 2.024 2.024 7 1.473 1.473 8 0.187 0.187 9 0.741 0.741 10 0.652 0.652 11 0.163 0.163 12 0.315 0.315 13 0.972 0.972 14 1.180 1.180 15 1.818 1.818 Successfully made LAIs/SAIs/heights for month 4 LAI Output for month 5 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.008 3.008 2 1.672 1.672 3 0.990 0.990 4 4.841 4.841 5 4.206 4.206 6 2.307 2.307 7 2.315 2.315 8 0.829 0.829 9 0.768 0.768 10 0.740 0.740 11 0.369 0.369 12 0.471 0.471 13 1.194 1.194 14 1.330 1.330 15 2.116 2.116 Successfully made LAIs/SAIs/heights for month 5 LAI Output for month 6 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.712 3.712 2 2.833 2.833 3 2.242 2.242 4 4.781 4.781 5 4.054 4.054 6 2.565 2.565 7 2.863 2.863 8 2.466 2.466 9 0.633 0.633 10 0.887 0.887 11 0.945 0.945 12 0.962 0.962 13 1.506 1.506 14 1.415 1.415 15 2.552 2.552 Successfully made LAIs/SAIs/heights for month 6 LAI Output for month 7 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.847 3.847 2 3.400 3.400 3 2.776 2.776 4 4.888 4.888 5 4.156 4.156 6 2.835 2.835 7 2.898 2.898 8 3.025 3.025 9 0.537 0.537 10 0.982 0.982 11 1.393 1.393 12 1.360 1.360 13 1.636 1.636 14 1.522 1.522 15 2.814 2.814 Successfully made LAIs/SAIs/heights for month 7 LAI Output for month 8 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.638 3.638 2 3.066 3.066 3 2.286 2.286 4 5.089 5.089 5 4.273 4.273 6 2.974 2.974 7 2.769 2.769 8 2.374 2.374 9 0.504 0.504 10 0.916 0.916 11 1.095 1.095 12 1.056 1.056 13 1.452 1.452 14 1.531 1.531 15 2.587 2.587 Successfully made LAIs/SAIs/heights for month 8 LAI Output for month 9 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.305 3.305 2 2.644 2.644 3 0.540 0.540 4 5.220 5.220 5 4.253 4.253 6 3.087 3.087 7 2.234 2.234 8 0.555 0.555 9 0.462 0.462 10 0.687 0.687 11 0.521 0.521 12 0.531 0.531 13 1.103 1.103 14 1.364 1.364 15 2.050 2.050 Successfully made LAIs/SAIs/heights for month 9 LAI Output for month 10 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 3.017 3.017 2 2.345 2.345 3 0.166 0.166 4 5.155 5.155 5 4.140 4.140 6 2.909 2.909 7 1.491 1.491 8 0.064 0.064 9 0.430 0.430 10 0.541 0.541 11 0.312 0.312 12 0.355 0.355 13 0.923 0.923 14 1.159 1.159 15 1.710 1.710 Successfully made LAIs/SAIs/heights for month 10 LAI Output for month 11 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.797 2.797 2 2.112 2.112 3 0.276 0.276 4 5.050 5.050 5 3.994 3.994 6 2.442 2.442 7 1.181 1.181 8 0.308 0.308 9 0.480 0.480 10 0.478 0.478 11 0.195 0.195 12 0.284 0.284 13 0.855 0.855 14 1.046 1.046 15 1.569 1.569 Successfully made LAIs/SAIs/heights for month 11 LAI Output for month 12 ...................................................................... PFT input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... 0 0.000 0.000 1 2.642 2.642 2 1.918 1.918 3 0.332 0.332 4 4.840 4.840 5 3.849 3.849 6 1.907 1.907 7 1.181 1.181 8 0.363 0.363 9 0.512 0.512 10 0.456 0.456 11 0.173 0.173 12 0.305 0.305 13 0.810 0.810 14 0.971 0.971 15 1.498 1.498 Successfully made LAIs/SAIs/heights for month 12 ================================================================================ Attempting to make PFTs ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_landuse_ctsm52_histLUH2_2000.c20230226.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc dimid, length= 1 1440 dimid, length= 2 720 dimid, length= 3 64 num_cft = 64 ...................................................................... PFTs Output plant type output grid area 10**6 km**2 ...................................................................... not vegetated 24.338 needleleaf evergreen temperate tree 4.159 needleleaf evergreen boreal tree 5.724 needleleaf deciduous boreal tree 2.040 broadleaf evergreen tropical tree 13.108 broadleaf evergreen temperate tree 1.011 broadleaf deciduous tropical tree 1.864 broadleaf deciduous temperate tree 2.389 broadleaf deciduous boreal tree 0.956 broadleaf evergreen shrub 0.025 broadleaf deciduous temperate shrub 4.240 broadleaf deciduous boreal shrub 4.398 c3 arctic grass 7.074 c3 non-arctic grass 14.850 c4 grass 18.504 c3_crop 0.000 c3_irrigated 0.000 temperate_corn 0.713 irrigated_temperate_corn 0.129 spring_wheat 1.781 irrigated_spring_wheat 0.375 winter_wheat 0.000 irrigated_winter_wheat 0.000 temperate_soybean 0.522 irrigated_temperate_soybean 0.055 barley 0.469 irrigated_barley 0.042 winter_barley 0.000 irrigated_winter_barley 0.000 rye 0.096 irrigated_rye 0.001 winter_rye 0.000 irrigated_winter_rye 0.000 cassava 0.123 irrigated_cassava 0.004 citrus 0.048 irrigated citrus 0.017 cocoa 0.056 irrigated_cocoa 0.002 coffee 0.077 irrigated_coffee 0.007 cotton 0.198 irrigated_cotton 0.115 datepalm 0.004 irrigated_datepalm 0.005 foddergrass 3.348 irrigated_foddergrass 0.306 grapes 0.042 irrigated_grapes 0.015 groundnuts 0.152 irrigated_groundnuts 0.028 millet 0.324 irrigated_millet 0.036 oilpalm 0.059 irrigated_oilpalm 0.003 potatoes 0.175 irrigated_potatoes 0.018 pulses 0.603 irrigated_pulses 0.119 rapeseed 0.206 irrigated_rapeseed 0.045 rice 0.940 irrigated_rice 0.533 sorghum 0.366 irrigated_sorghum 0.045 sugarbeet 0.047 irrigated_sugarbeet 0.006 sugarcane 0.113 irrigated_sugarcane 0.040 sunflower 0.175 irrigated_sunflower 0.014 miscanthus 0.000 irrigated_miscanthus 0.000 switchgrass 0.000 irrigated_switchgrass 0.000 tropical_corn 0.547 irrigated_tropical_corn 0.061 tropical_soybean 0.210 irrigated_tropical_soybean 0.029 Successfully made PFTs mksrfdata writing land fraction from pft dataset ================================================================================ Attempting to make harvest fields ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_landuse_ctsm52_histLUH2_2000.c20230226.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc reading: HARVEST_VH1 mkharvest writing out 1d CONST_HARVEST_VH1 ...................................................................... diagnostics for CONST_HARVEST_VH1 surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_HARVES 17.605 17.605 all surface 510.100 510.100 reading: HARVEST_VH2 mkharvest writing out 1d CONST_HARVEST_VH2 ...................................................................... diagnostics for CONST_HARVEST_VH2 surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_HARVES 7.348 7.348 all surface 510.100 510.100 reading: HARVEST_SH1 mkharvest writing out 1d CONST_HARVEST_SH1 ...................................................................... diagnostics for CONST_HARVEST_SH1 surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_HARVES 9.319 9.319 all surface 510.100 510.100 reading: HARVEST_SH2 mkharvest writing out 1d CONST_HARVEST_SH2 ...................................................................... diagnostics for CONST_HARVEST_SH2 surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_HARVES 13.619 13.619 all surface 510.100 510.100 reading: HARVEST_SH3 mkharvest writing out 1d CONST_HARVEST_SH3 ...................................................................... diagnostics for CONST_HARVEST_SH3 surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_HARVES 20.124 20.124 all surface 510.100 510.100 reading: GRAZING mkharvest writing out 1d CONST_GRAZING ...................................................................... diagnostics for CONST_GRAZING surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... CONST_GRAZIN -15678.115 -15678.115 all surface 510.100 510.100 reading: FERTNITRO_CFT mkharvest writing out 2d CONST_FERTNITRO_CFT reading: UNREPRESENTED_PFT_LULCC mkharvest writing out 2d UNREPRESENTED_PFT_LULCC reading: UNREPRESENTED_CFT_LULCC mkharvest writing out 2d UNREPRESENTED_CFT_LULCC Successfully made harvest and grazing ================================================================================ Attempting to make %lake Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/lake_area/mksurf_lake_0.05x0.05_hist_clm5_hydrolakes_2000.cdf5.c20220325.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc Attempting to make %lake ..... ...................................................................... diagnostics for pct lake surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... pct lake 2.916 2.423 all surface 510.100 510.100 Successfully made %lake ================================================================================ Attempting to make lake depth Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_LakePnDepth_3x3min_simyr2017_MODISgrid.cdf5.c200305.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc Attempting to make lake depth ..... mklakdep writing out lakedepth ...................................................................... output diagnostics for lake depth with units = m global input sum= 11.048 global output sum 11.048 ...................................................................... Successfully made lake depth Attempting to make %wetland ..... mkwetlnd setting PCT_WETLAND to zero ================================================================================ Attempting to make %glacier ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_glacier_3x3min_simyr2000.c20210708.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc ...................................................................... diagnostics for pct glacier surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... pct glacier 15.991 14.441 all surface 510.100 510.100 Successfully made %glacier ================================================================================ Attempting to make glacier region ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_GlacierRegion_10x10min_nomask_cd5_c220131.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_10x10min_nomask_cdf5_c200129.nc mkglacierregion writing out glacier_region ............................................................ index input grid area output grid area 10**6 km**2 10**6 km**2 ............................................................ 0 0.000 0.000 1 1.904 1.715 2 2.329 2.518 3 34.170 34.170 Successfully made glacier region ================================================================================ Attempting to make %sand, %clay, orgc, cfrag, bulk, phaq ..... Input mapunit file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_soil_mapunits_5x5min_WISE.c220330.nc Input lookup table file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_soil_lookup.10level.WISE.c220330.nc Input mesh/grid file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_5x5min_nomask_cdf5_c200129.nc reading mesh_i directly in mksoiltex Reading in mapunit data in mksoiltex Setting mask in mesh where mapunit data is 0 mksoiltex before route handle creation mksoiltex after route handle creation mksoiltex before call to dynamic mask set creation mksoiltex after call to dynamic mask set creation mksoiltex mksoiltex writing out mapunits WARNING: assigning sand_o = -4 to 99% WARNING: assigning other sand_o < 0 to 43% WARNING: assigning clay_o = -4 to 1% WARNING: assigning other clay_o < 0 to 18% WARNING: assigning orgc_o = -4 to 1 WARNING: assigning other orgc_o < 0 to 0 WARNING: same warnings for cfrag_o as for orgc_o WARNING: assigning bulk_o < 0 to 1.5 WARNING: assigning phaq_o < 0 to 7 mksoiltex writing out soil percent sand mksoiltex writing out soil percent clay mksoiltex writing out soil organic matter mksoiltex writing out soil organic carbon content mksoiltex writing out coarse fragments in soil mksoiltex writing out soil bulk density mksoiltex writing out soil pH measured in H2O Successfully made %sand, %clay, orgc, cfrag, bulk, phaq ..... ================================================================================ Attempting to make soil color classes ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/pftcftdynharv.0.25x0.25.LUH2.histsimyr1850-2015.c20230226/mksrf_soilcolor_ctsm52_histLUH2_2005.c20230226.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.25x0.25_nomask_cdf5_c200129.nc mksoilcol writing out soil color mksoilcol writing out mksoil_color ............................................................ index input grid area output grid area 10**6 km**2 10**6 km**2 ............................................................ 0 0.000 0.000 1 1.826 2.207 2 1.647 2.576 3 1.674 1.770 4 1.766 1.569 5 1.707 2.339 6 1.571 0.602 7 1.587 0.378 8 1.916 2.201 9 2.404 1.209 10 20.101 33.227 11 4.652 3.161 12 7.168 7.042 13 10.450 14.285 14 14.405 19.378 15 20.822 289.561 16 23.782 48.187 17 13.615 23.436 18 9.997 13.686 19 9.341 21.869 20 6.368 21.414 Successfully made soil color classes ================================================================================ Attempting to make %fmax ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_fmax_0.125x0.125_c200220.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.125x0.125_nomask_cdf5_c200129.nc ...................................................................... diagnostics for Max Fractional Sataturated Area surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... Max Fraction 0.629 0.629 all surface 510.100 510.100 mksoilfmax writing out soil fmax (maximum fraction saturated area) Successfully made %fmax ================================================================================ Attempting to make GDP..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_gdp_0.5x0.5_AVHRR_simyr2000.c130228.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc mkgdp writing out gdp ...................................................................... output diagnostics for GDP with units = x1000 US$ per capita global input sum= 7.679 global output sum 7.679 ...................................................................... Successfully made GDP ================================================================================ Attempting to make peat ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_peatf_0.5x0.5_AVHRR_simyr2000.c130228.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc mkpeat writing out peatland fraction ...................................................................... diagnostics for Peat surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... Peat 2.157 2.157 all surface 510.100 510.100 Successfully made peat Attempting to make soildepth ..... mksoildepth writing out soil depth ...................................................................... diagnostics for Soildepth surface type input grid area output grid area 10**6 km**2 10**6 km**2 ...................................................................... Soildepth 2048.572 2048.572 all surface 510.100 510.100 Successfully made soildepth ================================================================================ Attempting to make agricultural fire peak month data ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_abm_0.5x0.5_AVHRR_simyr2000.c130201.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc mkagfirepkmon writing abm (agricultural fire peak month) ............................................................ index input grid area output grid area 10**6 km**2 10**6 km**2 ............................................................ 1 2.516 6.329 2 2.653 6.136 3 3.780 10.197 4 5.981 17.818 5 4.796 15.721 6 2.794 9.557 7 4.168 11.526 8 6.095 19.381 9 5.286 16.899 10 4.286 12.339 11 2.686 5.099 12 2.669 7.613 13 115.921 371.484 Successfully made Agricultural fire peak month ================================================================================ Attempting to make %urban ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/gao_oneill_urban/historical/urban_properties_GaoOneil_05deg_ThreeClass_2000_cdf5_c20220910.nc Successfully made %urban ================================================================================ Attempting to make urban region ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/gao_oneill_urban/historical/urban_properties_GaoOneil_05deg_ThreeClass_2000_cdf5_c20220910.nc max urban regions = 33 Successfully made urban region ............................................................ index input grid area output grid area 10**6 km**2 10**6 km**2 ............................................................ 1 1.582 1.422 2 7.809 7.794 3 8.559 8.463 4 6.609 6.428 5 5.680 5.399 6 10.158 10.317 7 0.295 0.292 8 9.436 9.283 9 5.824 5.953 10 0.712 0.606 11 2.181 2.222 12 2.251 2.249 13 3.194 3.051 14 2.548 2.276 15 6.032 6.129 16 9.509 9.516 17 1.240 1.187 18 0.842 1.000 19 1.774 1.629 20 1.281 1.127 21 1.025 1.029 22 17.019 17.460 23 3.087 3.040 24 1.943 2.144 25 1.405 1.550 26 1.296 1.400 27 4.844 4.984 28 1.122 0.993 29 1.801 1.866 30 4.210 4.230 31 5.183 5.276 32 5.043 5.214 33 1.118 1.081 mksrfdata writing out urban region id ================================================================================ Attempting to make urban topo elevation ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_topo.10min.cdf5.c220201.nc ...................................................................... output diagnostics for Urban elev variable with units = m global input sum= 230.498 global output sum 230.498 ...................................................................... Successfully made elevation ================================================================================ Attempting to make Topography statistics..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_topostats_1km-merge-10min_HYDRO1K-merge-nomask_simyr2000.c130402.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UGRID_1km-merge-10min_HYDRO1K-merge-nomask_cdf5_c130402.nc mktopostats creating a routehandle mktopostats finished creating a routehandle ...................................................................... output diagnostics for Topo Std Dev with units = m global input sum= 802.194 global output sum 131.984 ...................................................................... ...................................................................... output diagnostics for Slope with units = degrees global input sum= 1.483 global output sum 0.815 ...................................................................... mktopostats writing topo_stddev mktopostats writing slope Successfully made Topography statistics ================================================================================ Attempting to make VOC emission factors ..... Input data file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_vocef_0.5x0.5_simyr2000.c110531.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_0.5x0.5_nomask_cdf5_c200129.nc mkvocef writing out voc emission factors Successfully made VOC Emission Factors sum over domain of pft 0 21650.0932412240 sum over domain of pft 1 4030.63620458289 sum over domain of pft 2 4083.47952826839 sum over domain of pft 3 1134.92079269050 sum over domain of pft 4 17216.3469429881 sum over domain of pft 5 1832.85369377135 sum over domain of pft 6 1932.02720971927 sum over domain of pft 7 2192.67188307690 sum over domain of pft 8 866.908434949233 sum over domain of pft 9 33.4910117935870 sum over domain of pft 10 3125.04680355230 sum over domain of pft 11 3422.68765205176 sum over domain of pft 12 9232.36556267715 sum over domain of pft 13 13014.0696393266 sum over domain of pft 14 22891.1273804576 sum over domain of cft 15 0.000000000000000E+000 sum over domain of cft 16 0.000000000000000E+000 sum over domain of cft 17 433.828566675332 sum over domain of cft 18 92.3579907668194 sum over domain of cft 19 1172.43942457001 sum over domain of cft 20 247.477256848230 sum over domain of cft 21 0.000000000000000E+000 sum over domain of cft 22 0.000000000000000E+000 sum over domain of cft 23 294.101519503393 sum over domain of cft 24 36.6721955612854 sum over domain of cft 25 348.183286406967 sum over domain of cft 26 32.7931610937213 sum over domain of cft 27 0.000000000000000E+000 sum over domain of cft 28 0.000000000000000E+000 sum over domain of cft 29 54.0809312146573 sum over domain of cft 30 1.22831337131799 sum over domain of cft 31 0.000000000000000E+000 sum over domain of cft 32 0.000000000000000E+000 sum over domain of cft 33 122.834716141813 sum over domain of cft 34 8.40053918550356 sum over domain of cft 35 52.9430723346083 sum over domain of cft 36 25.6525089128678 sum over domain of cft 37 86.0197813227178 sum over domain of cft 38 6.73083883063437 sum over domain of cft 39 100.933316592629 sum over domain of cft 40 14.7741045877710 sum over domain of cft 41 153.241464119971 sum over domain of cft 42 81.5985053029852 sum over domain of cft 43 4.54037329620791 sum over domain of cft 44 3.79851350175029 sum over domain of cft 45 2960.78658391630 sum over domain of cft 46 327.822285410991 sum over domain of cft 47 43.1572968373417 sum over domain of cft 48 19.2091958259697 sum over domain of cft 49 145.749004987053 sum over domain of cft 50 30.5183598617838 sum over domain of cft 51 185.562412219209 sum over domain of cft 52 22.2733908199175 sum over domain of cft 53 99.0757266194833 sum over domain of cft 54 6.39093229060794 sum over domain of cft 55 111.572947747583 sum over domain of cft 56 14.2277926805985 sum over domain of cft 57 432.832143105111 sum over domain of cft 58 103.319873584031 sum over domain of cft 59 128.153264733509 sum over domain of cft 60 27.3339214565751 sum over domain of cft 61 950.536246592828 sum over domain of cft 62 566.444350070768 sum over domain of cft 63 231.569212219470 sum over domain of cft 64 34.5829773745903 sum over domain of cft 65 31.2989794184355 sum over domain of cft 66 4.92806857935380 sum over domain of cft 67 189.024578314969 sum over domain of cft 68 46.8114891565153 sum over domain of cft 69 114.860338088918 sum over domain of cft 70 9.51115820187589 sum over domain of cft 71 0.000000000000000E+000 sum over domain of cft 72 0.000000000000000E+000 sum over domain of cft 73 0.000000000000000E+000 sum over domain of cft 74 0.000000000000000E+000 sum over domain of cft 75 474.311373489840 sum over domain of cft 76 60.6112615932360 sum over domain of cft 77 120.504704526806 sum over domain of cft 78 19.0913639069930 mksrfdata writing out percnt urban Attempting to make Urban Parameters ..... Opening input urban parameter file: /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/gao_oneill_urban/historical/urban_properties_GaoOneil_05deg_ThreeClass_2000_cdf5_c20220910.nc Successfully made Urban Parameters mksrfdata writing out PCT_URBAN mksrfdata writing out PCT_GLACIER mksrfdata writing out PCT_LAKE mksrfdata writing out PCT_WETLAND mksrfdata writing out PCT_OCEAN mksrfdata writing PCT_NATVEG mksrfdata writing PCT_CROP mksrfdata writing PCT_NAT_PFT mksrfdata writing PCT_CFT mksrfdata writing LANDFRAC_MKSURFDATA mkglcmecInit writing out GLC_MEC ================================================================================ Attempting to make percent elevation class and mean elevation for glaciers ..... Input file is /glade/p/cesm/cseg/inputdata/lnd/clm2/rawdata/mksrf_glacier_3x3min_simyr2000.c20210708.nc Input mesh file is /glade/p/cesm/cseg/inputdata/lnd/clm2/mappingdata/grids/UNSTRUCTgrid_3x3min_nomask_cdf5_c200129.nc mkglcmec writing out pct_glc_mec mkglcmec writing out topo_glc_mec Successfully made percent elevation class and mean elevation for glaciers Successfully created surface data output file = surfdata_mpasa480_hist_2000_78pfts_c240130.nc This file contains the land model surface data Successfully ran mksurfdata_esmf